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Chromoanagenesis from radiation-induced genome damage in Populus

• Authors : Guo, Weier; Comai, Luca; Henry, Isabelle M.

• Source: PLoS Genetics. August 25, 2021, Vol. 17 Issue 8, e1009735

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Reinvention of hermaphroditism via activation of a RADIALIS-like gene in hexaploid persimmon.

• Authors : Masuda, Kanae; Ikeda, Yoko; Matsuura, Takakazu

• Source: Nature Plants; Mar2022, Vol. 8 Issue 3, p217-224, 8p

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Epigenetic Regulation of the Sex Determination Gene MeGI in Polyploid Persimmon

• Authors : Akagi, Takashi; Henry, Isabelle M.; Kawai, Takashi

• Source: Plant Cell. 28(12):2905-2915

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Diploid mint (M. longifolia) can produce spearmint type oil with a high yield potential.

• Authors : Kippes, Nestor; Tsai, Helen; Lieberman, Meric

Subjects: SPEARMINT; PETROLEUM; SYSTEMS development

• Source: Scientific Reports; 12/7/2021, Vol. 11 Issue 1, p1-11, 11p

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A Y-Encoded Suppressor of Feminization Arose via Lineage-Specific Duplication of a Cytokinin Response Regulator in Kiwifruit

• Authors : Akagi, Takashi; Henry, Isabelle M.; Ohtani, Haruka

• Source: The Plant Cell. April 2018, Vol. 30 Issue 4, p780, 16 p.

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Correction: The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants

• Authors : Akagi, Takashi; Shirasawa, Kenta; Nagasaki, Hideki

• Source: PLoS Genetics. May 26, 2020, Vol. 16 Issue 5, e1008845

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A System for Dosage-Based Functional Genomics in Poplar

• Authors : Henry, Isabelle M.; Zinkgraf, Matthew S.; Groover, Andrew T.

• Source: Plant Cell. 27(9):2370-2383

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The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants

• Authors : Akagi, Takashi; Shirasawa, Kenta; Nagasaki, Hideki

• Source: PLoS Genetics. Feb 18, 2020, Vol. 16 Issue 2, e1008566

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Significant enhancement of fatty acid composition in seeds of the allohexaploid, Camelina sativa, using CRISPR/Cas9 gene editing

• Authors : Jiang, Wen Zhi; Henry, Isabelle M.; Lynagh, Peter G.

• Source: Plant Biotechnology Journal. May, 2017, Vol. 15 Issue 5, p648, 10 p.

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Rapid identification of lettuce seed germination mutants by bulked segregant analysis and whole genome sequencing

• Authors : Huo, Heqiang; Henry, Isabelle M.; Coppoolse, Eric R.

• Source: Plant Journal. Nov, 2016, Vol. 88 Issue 3, p345, 16 p.

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A Y-chromosome–encoded small RNA acts as a sex determinant in persimmons

• Authors : Akagi, Takashi; Henry, Isabelle M.; Tao, Ryutaro

• Source: Science. 346(6209):646-650

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Genetic Regulation of Vessel Morphology in Populus.

• Authors : Rodriguez-Zaccaro, F. Daniela; Henry, Isabelle M.; Groover, Andrew

Subjects: GENETIC regulation; COTTONWOOD; PHENOTYPIC plasticity

• Source: Frontiers in Plant Science; 8/23/2021, Vol. 12, p1-12, 12p

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Rare instances of haploid inducer DNA in potato dihaploids and ploidy-dependent genome instability.

• Authors : Amundson, Kirk R.; Ordoñez, Benny; Santayana, Monica

• Source: Plant Cell; Jul2021, Vol. 33 Issue 7, p2149-2163, 15p

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PL-4 (CIP596131.4): an Improved Potato Haploid Inducer.

• Authors : Ordoñez, Benny; Santayana, Monica; Aponte, Mariela

Subjects: ELITE (Social sciences); FRUIT; GENETICSINTERNATIONAL Potato Center

• Source: American Journal of Potato Research; Jun2021, Vol. 98 Issue 3, p255-262, 8p

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Efficient Genome-Wide Detection and Cataloging of EMS-Induced Mutations Using Exome Capture and Next-Generation Sequencing

• Authors : Henry, Isabelle M.; Nagalakshmi, Ugrappa; Lieberman, Meric C.

• Source: The Plant Cell. 26(4):1382-1397

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The BOY NAMED SUE Quantitative Trait Locus Confers Increased Meiotic Stability to an Adapted Natural Allopolyploid of Arabidopsis

• Authors : Henry, Isabelle M.; Dilkes, Brian P.; Tyagi, Anand

• Source: The Plant Cell. 26(1):181-194

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systems genetics approach to deciphering the effect of dosage variation on leaf morphology in Populus.

• Authors : Bastiaanse, Héloïse; Henry, Isabelle M; Tsai, Helen

• Source: Plant Cell; Apr2021, Vol. 33 Issue 4, p940-960, 21p

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Rapid creation of Arabidopsis doubled haploid lines for quantitative trait locus mapping

• Authors : Seymour, Danelle K.; Filiault, Daniele L.; Henry, Isabelle M.

• Source: Proceedings of the National Academy of Sciences of the United States of America. 109(11):4227-4232

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Structure and regulation of the Asr gene family in banana

• Authors : Henry, Isabelle M.; Carpentier, Sebastien C.; Pampurova, Suzana

• Source: Planta. 234(4):785-798

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Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling

• Authors : Pignatta, Daniela; Dilkes, Brian P.; Yoo, Suk-Young

• Source: The New Phytologist. 186(1):194-206

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Genome-wide study on the polysomic genetic factors conferring plasticity of flower sexuality in hexaploid persimmon.

• Authors : Masuda, Kanae; Yamamoto, Eiji; Shirasawa, Kenta

• Source: DNA Research; Jun2020, Vol. 27 Issue 3, p1-10, 10p

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High-Throughput Analysis of T-DNA Location and Structure Using Sequence Capture

• Authors : Inagaki, Soichi; Henry, Isabelle M.

• Source: PLoS ONE. Oct 7, 2015, Vol. 10 Issue 10

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Insights into the Prunus-Specific S-RNase-Based Self-Incompatibility System from a Genome-Wide Analysis of the Evolutionary Radiation of S Locus-Related F-box Genes.

• Authors : Takashi Akagi^1,2; Henry, Isabelle M.²; Takuya Morimoto¹

• Source: Plant & Cell Physiology. Jun2016, Vol. 57 Issue 6, p1281-1294. 14p.

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Phenotypic consequences of aneuploidy in Arabidopsis thaliana

• Authors : Henry, Isabelle M.; Dilkes, Brian P.; Miller, Eric S.

• Source: Genetics. Dec 2010, Vol. 186 Issue 4, p1231, 15 p.

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Genetic basis for dosage sensitivity in Arabidopsis thaliana

• Authors : Henry, Isabelle M.; Dilkes, Brian P.; Comai, Luca

• Source: PLoS Genetics. April 2007, Vol. 3 Issue 4, p593, 10 p.

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Molecular karyotyping and aneuploidy detection in Arabidopsis thaliana using quantitative fluorescent polymerase chain reaction

• Authors : Henry, Isabelle M.; Dilkes, Brian P.; Comai, Luca

• Source: Plant Journal. Oct 2006, Vol. 48 Issue 2, p307, 13 p.

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A Y-chromosome-encoded small RNA acts as a sex determinant in persimmons.

• Authors : Takashi Akagi^1,2; Henry, Isabelle M.¹; Ryutaro Tao²

• Source: Science. 10/31/2014, Vol. 346 Issue 6209, p646-650. 5p.

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Assessment of RNAi-induced silencing in banana (Musa spp.)

• Authors : Dang, Tuong Vi T; Windelinckx, Saskia; Henry, Isabelle M

• Source: BMC Research Notes. Sept 18, 2014, Vol. 7 Issue 1

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Two Y-chromosome-encoded genes determine sex in kiwifruit.

• Authors : Akagi, Takashi; Pilkington, Sarah M.; Varkonyi-Gasic, Erika

• Source: Nature Plants; Aug2019, Vol. 5 Issue 8, p801-809, 9p

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Aneuploidy and genetic variation in the Arabidopsis thaliana triploid response

• Authors : Henry, Isabelle M.; Dilkes, Brian P.; Young, Kim

• Source: Genetics. August 2005, Vol. 170 Issue 4, p1979, 10 p.

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Reference genome-independent assessment of mutation density using restriction enzyme-phased sequencing

• Authors : Monson-Miller Jennifer; Sanchez-Mendez Diana C; Fass Joseph

Subjects: Biotechnology; TP248.13-248.65; Genetics

• Source: BMC Genomics, Vol 13, Iss 1, p 72 (2012)

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Author Correction: Diploid mint (M. longifolia) can produce spearmint type oil with a high yield potential.

• Authors : Kippes, Nestor; Tsai, Helen; Lieberman, Meric

Subjects: SPEARMINT; RELATIONSHIP quality

• Source: Scientific Reports; 1/13/2022, Vol. 12 Issue 1, p1-1, 1p

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Comparison of ESTs from juvenile and adult phases of the giant unicellular green alga Acetabularia acetabulum

• Authors : Grotewold Erich; Schwarz-Sommer Zsuzsanna; Hernandez J Marcela

Subjects: Botany; QK1-989

• Source: BMC Plant Biology, Vol 4, Iss 1, p 3 (2004)

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Y-Encoded Suppressor of Feminization Arose via Lineage-Specific Duplication of a Cytokinin Response Regulator in Kiwifruit.

• Authors : Akagi, Takashi; Henry, Isabelle M.; Ohtani, Haruka

• Source: Plant Cell; Apr2018, Vol. 30 Issue 4, p780-795, 16p

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One Hundred Ways to Invent the Sexes: Theoretical and Observed Paths to Dioecy in Plants.

• Authors : Henry, Isabelle M.; Akagi, Takashi; Tao, Ryutaro

• Source: Annual Review of Plant Biology; Apr2018, Vol. 69, p553-575, 19p

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Next-Generation Sequencing for Targeted Discovery of Rare Mutations in Rice.

• Authors : Burkart-Waco, Diana; Tsai, Helen; Ngo, Kathie

• Source: Biotechnologies for Plant Mutation Breeding; 2017, p323-340, 18p

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Determining Mutation Density Using Restriction Enzyme Sequence Comparative Analysis (RESCAN).

• Authors : Burkart-Waco, Diana; Henry, Isabelle M.; Ngo, Kathie

• Source: Biotechnologies for Plant Mutation Breeding; 2017, p305-321, 17p

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Highly active zinc-finger nucleases by extended modular assembly

• Authors : Bhakta, Mital S.; Henry, Isabelle M.; Ousterout, David G.

• Source: Genome Research. March 2013, Vol. 23 Issue 3, p530

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Comparison of ESTs from juvenile and adult phases of the giant unicellular green alga Acetabularia acetabulum.

• Authors : Henry, Isabelle M.¹ ; Wilkinson, Mark D.² ; Hernandez, J. Marcela³

• Source: BMC Plant Biology. 2004, Vol. 4, p1-15. 15p. 5 Diagrams, 1 Chart, 2 Graphs.

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A Y-Encoded Suppressor of Feminization Arose via Lineage-Specific Duplication of a Cytokinin Response Regulator in Kiwifruit

• Authors : Akagi, Takashi; Henry, Isabelle, M.; Ohtani, Haruka

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System for Dosage-Based Functional Genomics in Poplar.

• Authors : Henry, Isabelle M.; Zinkgraf, Matthew S.; Groover, Andrew T.

• Source: Plant Cell; Sep2015, Vol. 27 Issue 9, p2370-2383, 14p

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A genome-wide analysis of Cas9 binding specificity using ChIP-seq and targeted sequence capture.

• Authors : O'Geen, Henriette; Henry, Isabelle M.; Bhakta, Mital S.

• Source: Nucleic Acids Research; 3/31/2015, Vol. 43 Issue 6, p3389-3404, 16p

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A haploid genetics toolbox for Arabidopsis thaliana.

• Authors : Ravi, Maruthachalam; Anand Marimuthu, Mohan Prem; Tan, Ek Han

• Source: Nature Communications; Oct2014, Vol. 5 Issue 10, p1-8, 8p, 1 Color Photograph, 1 Graph

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Assessment of RNAi-induced silencing in banana (Musa spp.).

• Authors : Tuong Vi T Dang; Windelinckx, Saskia; Henry, Isabelle M.

• Source: BMC Research Notes; 2014, Vol. 7 Issue 1, p655-667, 13p, 2 Color Photographs, 1 Diagram, 1 Chart, 4 Graphs

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BOY NAMED SUE Quantitative Trait Locus Confers Increased Meiotic Stability to an Adapted Natural Allopolyploid of Arabidopsis.

• Authors : Henry, Isabelle M.; Dilkes, Brian P.; Tyagi, Anand

• Source: Plant Cell; Jan2014, Vol. 26 Issue 1, p181-194, 14p

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A system for dosage-based functional genomics in poplar

• Authors : Henry, Isabelle, M.; Zinkgraf, Matthew, S.; Groover, Andrew, T.

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Precious Cells Contain Precious Information.

• Authors : Walker, John M.; Grotewold, Erich; Henry, Isabelle M.

• Source: Plant Functional Genomics; 2003, p59-78, 20p

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Efficient genome-wide detection and cataloging of EMS-induced mutations using exome capture and next-generation sequencing

• Authors : Henry, Isabelle, M.; Nagalakshmi, Ugrappa; Lieberman, Meric, C.

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The BOY NAMED SUE quantitative trait locus confers increased meiotic stability to an adapted natural allopolyploid of arabidopsi

• Authors : Henry, Isabelle, M.; Dilkes, Brian, P.; Tyagi, Anand

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Detection aneuploidy in Arabidopsis thalianausing Fluorescent In-situHybridization (FISH) analysis — RETRACTED

• Authors : Tyagi, Anand P.; Henry, Isabelle M.; Comai, Luca

• Source: South Pacific Journal of Natural and Applied Sciences; 2011, Vol. 29 Issue: 1 p12-16, 5p

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